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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889637.1_cds_XP_016444350.1_39420
CDS Infomation

[gene=LOC107769626] [db_xref=GeneID:107769626] [protein=protein SIEL-like isoform X4] [protein_id=XP_016444350.1] [location=complement(join(5500..5516,5597..5643,6289..6776,7563..7652,8785..8925,9388..9579,9696..9929,10518..10598,11728..12354))] [gbkey=CDS]
Sequence

ATGGAACACCACCTCCGGAGGAATTTGGAGATCAACGAGAACATCAGGCCTCAAGCTCTC
TTACAAGCCCTCTCTCTCATCGTCAACCCTTCAACCTCCGACTCCACCCTTTCATCCATA
CTCAAAACCCTAACGCTCTCTCTCAAAAATCCTAATACTAATCCTTTTCTCAGCCACCAC
ATTCTCCGCCTCTTCTCTCTACTTTTCCATCACCGTCTACAGCTCCCTCACAACCTCATC
TCCACCGTCCGTGAATTCTCTCTCCTCCCTTCAACTTCCGCGCGCTCACTCGCCGATTCC
CTCGCGTGTCTCTCCATCTCGGATATCAACGTCAACGATGAATCGACATTCCTCTCACTC
GTTCTTCGTCCCTGTATTTCTGTTCGCCATTGGTTGCTTTTGAATGCGAGTAAATTTGAC
ATACGGCCGTCGGTTTTGCTTACGGTTCTGCTAGGATTTACGAAGGACCCCTATCCATAC
ATTCGTGGTGTTGCTTTGGATGGATTAGCTGAGTTGTGCAAGTGCATTGTTGTCGAAGAT
GAAAGTCTCATCCACGGTTGCTATTTTCGAGCTGTTGAGTTTCTGTTTGACTCCGAGGAC
TCAGTGCGATGCTCTGCTGTTCGTGCAGTTAGTGCATGCGGGCAGTTAATTGTGGCATCT
AAACAAGAGAGAAGTAAAAGGGACTGGTCTGATGCATTATTTCTGCAGCTATGTTCAATG
GTGCGAGACATGAGTGTCAAAGTCAGGATTGAAGTTTTTAGTGCCCTAGGGAAGATTGAA
ATTGTTTCGGAATATATTCTGTTACAAACACTATCTAAGAAAGCTTCATCTGCAACAAAA
GAAATGAATTTTCCTGGCCAGTATGCTGATAAAATTTTCAGGATACCAGCATCGAGTGCT
AGTTTTGCTTTTCTACATGGGCTGGAGGATGAATTTAGTGAGGTAAGAGAATCTGCTTGC
CGAGCTTTGCAAACATTGGCTATCCTTTCTGCTGATTTTACTAATGAGGTTGTGAACTTT
CTAATGGACGTACTTAATGATGATTCAACGGCTGTAAGATTACAAGCTTTAGATACTATG
CATCATGTGGCAATGGTTGGCCAGCTAAAGGTGCAACAAGCGCATCTGCATATGTTTCTT
GGGATTCTACTTGACAGTCACAGCTTGATAAGATGTACAGCGAGGAAGGTACTAAAACTG
ACAGAACTACCGAGCTTGGCTATGTTCAAAATGTGTGTAGATGGACTTATAAGAGATTTT
GAATTGTATCCACAGGATGAAACTGAAGTCTTTTCCGCTTTGTTCATGGTTGGTCAAAAC
CACGGAAAGTTTTTAGTCAGCTTGATTAATGAAGTTTCCCAAATGGTAGAGCCCTCTTCT
GGAGGTAAGTTGGGTTATGACAATGCGAGAAAAGCTTCATATTTAGTGTTAGCCACCTCT
GCGCCAGTCTCAATGAAGCAGCAAACTTGCAGCATTCCACCAAGAATATTCTCTTATGCA
GTCACGCTATTAGGGAGAATCACTCGTAGTTTGGCTGAAATAGTTGACCAGAGAACACTT
TTGACTTATCTTTCTTATTGCAGTAGATTCACATTTGTTTCTGCATCGGAGTTTTTTAAA
GTGGAAAAGCATCTGGAGGGATGTGATGTGCAATTGATACAAAGATGTGAAGTTATCTCT
AATTATCACATTCGGAGGAAATTACAACTGAAGGAAGCAGAAAGCTCGCTTTTGGACTTC
CAGGTTGAGCAGAATAAAGAGATAAACTGTGTGAATATCATCCTTCAGGCGGTAATAGAC
ATTTGGCCATCGCTGAAACTTGGATTGATTGATGAAGTAACTCGAACATTGAGGAATTTG
AAGGCAGAATTGGCAATGATATCAGATAACAATCACAGCGGAGTTCTACTGCCATAA

Peptide Sequence

PEP ID

XP_016444350.1
PEP Infomation

PREDICTED: protein SIEL-like isoform X4 [Nicotiana tabacum]
Sequence

MEHHLRRNLEINENIRPQALLQALSLIVNPSTSDSTLSSILKTLTLSLKNPNTNPFLSHH
ILRLFSLLFHHRLQLPHNLISTVREFSLLPSTSARSLADSLACLSISDINVNDESTFLSL
VLRPCISVRHWLLLNASKFDIRPSVLLTVLLGFTKDPYPYIRGVALDGLAELCKCIVVED
ESLIHGCYFRAVEFLFDSEDSVRCSAVRAVSACGQLIVASKQERSKRDWSDALFLQLCSM
VRDMSVKVRIEVFSALGKIEIVSEYILLQTLSKKASSATKEMNFPGQYADKIFRIPASSA
SFAFLHGLEDEFSEVRESACRALQTLAILSADFTNEVVNFLMDVLNDDSTAVRLQALDTM
HHVAMVGQLKVQQAHLHMFLGILLDSHSLIRCTARKVLKLTELPSLAMFKMCVDGLIRDF
ELYPQDETEVFSALFMVGQNHGKFLVSLINEVSQMVEPSSGGKLGYDNARKASYLVLATS
APVSMKQQTCSIPPRIFSYAVTLLGRITRSLAEIVDQRTLLTYLSYCSRFTFVSASEFFK
VEKHLEGCDVQLIQRCEVISNYHIRRKLQLKEAESSLLDFQVEQNKEINCVNIILQAVID
IWPSLKLGLIDEVTRTLRNLKAELAMISDNNHSGVLLP

Transcript Sequence

Gene sequence data has not been registered.